Genetic diversity assessments of brown rot pathogen Monilinia fructicola based on the six simple sequence repeat loci

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dc.authorid0000-0002-1300-7493en_US
dc.authorid0000-0003-0791-975Xen_US
dc.authorscopusid57217183624en_US
dc.authorscopusid35389412700en_US
dc.authorwosidCSR-3973-2022en_US
dc.authorwosidM-2853-2014en_US
dc.contributor.authorGüven, Hakan
dc.contributor.authorEverhart, Sydney E.
dc.contributor.authorDe Miccolis Angelini, Rita Milvia
dc.contributor.authorÖzkılınç, Hilal
dc.date.accessioned2024-12-19T06:57:27Z
dc.date.available2024-12-19T06:57:27Z
dc.date.issued2021en_US
dc.departmentFakülteler, Fen Fakültesi, Moleküler Biyoloji ve Genetik Bölümü
dc.description.abstractMonilinia fructicola, causal agent of brown rot of stone fruits, is an economically important problem worldwide. Six of the sequence tagged microsatellite sites developed for M. fructicola were used to genotype 68 M. fructicola isolates, which included isolates from three cities in Turkey (n = 42) that were compared to isolates from the USA (n = 15) and Italy (n = 11). AMOVA indicated a significant differentiation among samples from the three different countries. Samples from Turkey represented with nine haplotypes indicating a low diversity according to these markers. Samples from the USA with 12 haplotypes showed the highest genetic diversity values among the sample group from the three countries. However, all the samples from Italy were found as a single haplotype with those markers. Based on Nei’s genetic distance measurements, the single genotype from Italy was distinct from the others and samples from Turkey and the USA were genetically closer to each other, which also presented on the principal coordinate plot. While informative, these results suggest that ascertainment bias in marker development may limit the power of these markers when applied to populations of M. fructicola from other locations in the world. Knowledge on genetic diversities and comparative analysis provides valuable insight for recent changes and movements in pathogen populations which is important for the disease management.en_US
dc.identifier.citationGüven, H., Everhart, S. E., Angelini, R. M. D. M., & Özkılınç, H. (2021). Genetic diversity assessments of brown rot pathogen Monilinia fructicola based on the six simple sequence repeat loci. Journal of Plant Diseases and Protection, 128(6), 1459–1465. https://doi.org/10.1007/s41348-021-00504-4en_US
dc.identifier.doi10.1007/s41348-021-00504-4
dc.identifier.endpage1465en_US
dc.identifier.issn1861-3829
dc.identifier.issn1861-3837
dc.identifier.issue6en_US
dc.identifier.scopus2-s2.0-85111564923
dc.identifier.startpage1459en_US
dc.identifier.urihttps://doi.org/10.1007/s41348-021-00504-4
dc.identifier.urihttps://hdl.handle.net/20.500.12428/6760
dc.identifier.volume128en_US
dc.identifier.wosWOS:000679785400001
dc.identifier.wosqualityQ2
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.institutionauthorGüven, Hakan
dc.institutionauthorÖzkılınç, Hilal
dc.language.isoen
dc.publisherSpringer Science and Business Media Deutschland GmbHen_US
dc.relation.ispartofJournal of Plant Diseases and Protectionen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectMoniliniaen_US
dc.subjectPopulation genetic analysisen_US
dc.subjectSimple sequence repeatsen_US
dc.titleGenetic diversity assessments of brown rot pathogen Monilinia fructicola based on the six simple sequence repeat loci
dc.typeArticle

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