Effect of the Environment on the Excitation Energy and Charge Transfer Pathways of the Heliobacterium modesticaldum Reaction Center

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Tarih

2025

Dergi Başlığı

Dergi ISSN

Cilt Başlığı

Yayıncı

Amer Chemical Soc

Erişim Hakkı

info:eu-repo/semantics/closedAccess

Özet

The spectroscopic properties and charge transfer (CT) processes in a tetrameric model of the homodimeric reaction center of Heliobacterium modesticaldum (HbRC) are presented. HbRC represents the simplest known analogue of other photosynthetic systems and comprises the special pair, SPP dimer molecule, adjacent cofactors Acc and Aoh, key amino acid residues (His537, Gln458, and Ser545), and two water molecules. Therefore, to assess the influence of the nearby surrounding environment, we compare a naked model-excluding all amino acid residues-with a full model that incorporates all nearby residues. We identify several bright states in the reaction center that trigger subsequent CT processes beyond that of the SPP dimer. Notably, one of the bright states, characterized as (SPP AccAoh)*, aligns with experimental observations. We also analyze the charge-separated configurations (SPPAcc)(+)(Aoh)(-) as the charge separation initial state (CSI) and (SPP)(+) Acc (Aoh)(-) as the charge separation final (CSF) state, along with intermediate processes such as (SPP)(+)(Acc)(-)Aoh and SPP(Acc)(+)(Aoh)(-). A key finding is that most of the calculated CSF states are energetically lower than those of the bright states, enabling electron transfer through a downhill CT pathway. Additionally, CSI states are energetically much lower in the full model, which in turn decreases the driving force energy that explicitly affects the rate. We have employed first-principles calculations based on Fermi's golden rule for the two models. Most rates are found to lie in the picosecond time scale, which is in line with observations. All electronic parameters are derived by using an optimally tuned screened range-separated hybrid functional within a polarizable continuum model, accounting for varying dielectric constants.

Açıklama

Anahtar Kelimeler

Photosynthetic Reaction-Center, Density-Functional Theory, Transfer States, Rational Design, Ab-Initio, Bacteriochlorin, Benchmarking

Kaynak

Journal of Physical Chemistry B

WoS Q Değeri

Q3

Scopus Q Değeri

Q2

Cilt

129

Sayı

41

Künye