Genetic structuring of Pseudopus apodus (Pallas, 1775) (Sauria: Anguidae) in north Anatolia, Turkey

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dc.authoridKeskin, Emre/0000-0002-7279-313X
dc.contributor.authorKeskin, Emre
dc.contributor.authorTok, Cemal Varol
dc.contributor.authorHayretdag, Sibel
dc.contributor.authorCicek, Kerim
dc.contributor.authorAyaz, Dincer
dc.date.accessioned2025-01-27T20:54:12Z
dc.date.available2025-01-27T20:54:12Z
dc.date.issued2013
dc.departmentÇanakkale Onsekiz Mart Üniversitesi
dc.description.abstractIn this study, mitochondrial 16S rRNA and cytochrome b sequences were used to infer the genetic structure of Pseudopus apodus (Pallas, 1775) populations sampled from 40 North latitude of Turkey. Mean percent G-C contents of 47.13 and 46.66 were determined for 16S rRNA and cytochrome b datasets, respectively. Two haplotypes were found using 16S rRNA dataset, with 6 variable loci and a haplotype diversity of 0.1053, while Cytochrome b dataset consist of 10 haplotypes, with 18 variable loci and a haplotype diversity of 0.1943. Also mean genetic distance was found to be eight times higher in the cytochrome b dataset. Kimura 2-parameter genetic distance matrix was evaluated together with neighbor joining tree and median joining network in order to reveal possible divergence points in both datasets. Results indicated signs of 3 regional populations, including potential cryptic species from Digor or subspecies from Samsun and Sinop. (C) 2013 Elsevier Ltd. All rights reserved.
dc.description.sponsorshipScientific and Technological Research Council of Turkey (TUBITAK) [108T559]; Biotechnology Institute of Ankara University; TUBITAK
dc.description.sponsorshipThis study constitutes part of a project [Project No: 108T559] supported by the Scientific and Technological Research Council of Turkey (TUBITAK). We are indebted to TUBITAK for the financial support it has provided. The authors wish to thank Professor Hilal Ozdag for advice and comments and Y.E. Dincaslan for his help in obtaining some of the specimens. The author(s) wish to acknowledge use of the Maptool program for analysis and graphics in this paper. Maptool is a product of SEATURTLE.ORG. (Information is available at http://www.seaturtle.org). The present work was partially supported by the Biotechnology Institute of Ankara University.
dc.identifier.doi10.1016/j.bse.2013.06.003
dc.identifier.endpage418
dc.identifier.issn0305-1978
dc.identifier.issn1873-2925
dc.identifier.scopus2-s2.0-84880353317
dc.identifier.scopusqualityQ2
dc.identifier.startpage411
dc.identifier.urihttps://doi.org/10.1016/j.bse.2013.06.003
dc.identifier.urihttps://hdl.handle.net/20.500.12428/26010
dc.identifier.volume50
dc.identifier.wosWOS:000325597600060
dc.identifier.wosqualityQ3
dc.indekslendigikaynakWeb of Science
dc.indekslendigikaynakScopus
dc.language.isoen
dc.publisherPergamon-Elsevier Science Ltd
dc.relation.ispartofBiochemical Systematics and Ecology
dc.relation.publicationcategoryinfo:eu-repo/semantics/openAccess
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WoS_20250125
dc.subjectPseudopus apodus
dc.subject16S rRNA
dc.subjectCytochrome b
dc.subjectMitochondrial DNA
dc.subjectPopulation genetics
dc.titleGenetic structuring of Pseudopus apodus (Pallas, 1775) (Sauria: Anguidae) in north Anatolia, Turkey
dc.typeArticle

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