DNA BARCODING STUDY ON Sideritis trojana Bornm. AN ENDEMIC MEDICINAL PLANT OF IDA MOUNTAIN, TURKEY

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dc.authoridVlachonasios, Konstantinos/0000-0003-1755-1645
dc.contributor.authorTezcan, Meltem
dc.contributor.authorVlachonasios, Konstantinos
dc.contributor.authorAkı, Cüneyt
dc.date.accessioned2025-01-27T20:45:43Z
dc.date.available2025-01-27T20:45:43Z
dc.date.issued2010
dc.departmentÇanakkale Onsekiz Mart Üniversitesi
dc.description.abstractDNA barcodes are short parts of DNA used to identify an unknown specimen of the species. DNA barcodes have been used in associating the stages of life, determining cryptic species, preventing illegal trade, etc. Herein, we used two DNA barcodes, trnH-psbA intergenic spacer and matK region to discriminate endemic Ida Mountain Sideritis trojana B. plant. We assessed the genetic relatives of S. trojana with the other Lamiaceae, and compared the classical taxonomic classifications of the species with the classifications obtained through DNA barcode trees. matK was found to be more suitable for DNA barcoding study because of the easiness of the alignment and constructing the tree. matK was generally enough to discriminate species. It can be used as a core barcode but in the identification-based DNA barcode investigations, combination of matK with a more variable region can be suggested.
dc.description.sponsorshipCOMU; AUTH
dc.description.sponsorshipAll of the methods and results that are given in this research were taken from a part of Miss Tezcan's M.Sc. thesis which was successfully completed in July 2009. TM was supported by LLP-Erasmus programm between COMU and AUTH.
dc.identifier.endpage1355
dc.identifier.issn1018-4619
dc.identifier.issn1610-2304
dc.identifier.issue7
dc.identifier.startpage1352
dc.identifier.urihttps://hdl.handle.net/20.500.12428/24693
dc.identifier.volume19
dc.identifier.wosWOS:000280514100018
dc.identifier.wosqualityQ4
dc.indekslendigikaynakWeb of Science
dc.language.isoen
dc.publisherParlar Scientific Publications (P S P)
dc.relation.ispartofFresenius Environmental Bulletin
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.snmzKA_WoS_20250125
dc.subjectSideritis trojana
dc.subjectmatK
dc.subjecttrnH- psbA
dc.subjectDNA barcoding
dc.titleDNA BARCODING STUDY ON Sideritis trojana Bornm. AN ENDEMIC MEDICINAL PLANT OF IDA MOUNTAIN, TURKEY
dc.typeArticle

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